Added first version of code
Added C++ version, requires kmer package to run, place in kmer/meryl
Remove SW dependency
Add scaling for different-length sequences
Adding some test data
basic rewrite
added test data
bug fixes
Adding simulated data
Remove test data to relocate to subfolder
Moving simulated data
various additions
made simhash
updates
Merge branch 'master' of https://bitbucket.org/skoren/fast-align

Conflicts:
	simulatedData/onlyFwd.groups
Merge branch 'master' of https://bitbucket.org/skoren/fast-align

Conflicts:
	simulatedData/both.groups
test implemenation of fast-align
removed dependence on openbitset
fixed build.xml
minor change
fixed incorrect iteration during lookup