[SPARK-2756] [mllib] Decision tree bug fixes

(1) Inconsistent aggregate (agg) indexing for unordered features.
(2) Fixed gain calculations for edge cases.
(3) One-off error in choosing thresholds for continuous features for small datasets.

Other updates, to help with tests:
* Updated DecisionTreeRunner to print more info.
* Added utility functions to DecisionTreeModel: toString, depth, numNodes

Bug fix details:

(1) Indexing was inconsistent for aggregate calculations for unordered features (in multiclass classification with categorical features, where the features had few enough values such that they could be considered unordered, i.e., isSpaceSufficientForAllCategoricalSplits=true).

* updateBinForUnorderedFeature indexed agg as (node, feature, featureValue, binIndex), where
** featureValue was from arr (so it was a feature value)
** binIndex was in [0,…, 2^(maxFeatureValue-1)-1)
* The rest of the code indexed agg as (node, feature, binIndex, label).
* Corrected this bug by changing updateBinForUnorderedFeature to use the second indexing pattern.

Unit tests in DecisionTreeSuite
* Updated a few tests to train a model and test its training accuracy, which catches the indexing bug from updateBinForUnorderedFeature() discussed above.
* Added new test (“stump with categorical variables for multiclass classification, with just enough bins”) to test bin extremes.

(2) Bug fix: calculateGainForSplit (for classification):
* It used to return dummy prediction values when either the right or left children had 0 weight.  These were incorrect for multiclass classification.  It has been corrected.

Updated impurities to allow for count = 0.  This was related to the above bug fix for calculateGainForSplit (for classification).

Small updates to documentation and coding style.

(3) Bug fix: Off-by-1 when finding thresholds for splits for continuous features.

* Exhibited bug in new test in DecisionTreeSuite: “stump with 1 continuous variable for binary classification, to check off-by-1 error”
* Description: When finding thresholds for possible splits for continuous features in DecisionTree.findSplitsBins, the thresholds were set according to individual training examples’ feature values. 
* Fix: The threshold is set to be the average of 2 consecutive (sorted) examples’ feature values.  E.g.: If the old code set the threshold using example i, the new code sets the threshold using exam
* Note: In 4 DecisionTreeSuite tests with all labels identical, removed check of threshold since it is somewhat arbitrary.

CC: @mengxr
Maybe we can make data format an optional argument (default to LibSVM). One reason is that the dense format is deprecated in v1.1. We support either LIBSVM format or MLlib's own format `(label,[v0,v1,...])` or `(label,[i0,i1,...],[vi0,vi1,...])`. Also, it is a little weird to have this as the second required argument after input data.