branch for prerelease 56.0 as a copy of trunk
backported (reintegrated) a bug fix from trunk
run check on whole bam file, not just forward read, otherwise check fails if there is an inline index in read 2
updated Changes file
Change name in POD and remove tab characters, and other minor changes
trivial tweeks: no functional changes
Re-generate the schema using preserve_case
More test for verify_bam_id
backported  releases 55.3-55.5 from trunk
backported a patch to trunk
added usage message, removed unused code
two new command line options to control reported tags
check stdin is not a terminal
perlcritic fixes for tag sniffer
Remove trailing blank line to avoid duplicate key error from YAML load
test db credentials should be for the local host
Remove duplicate info field
usage message and bug fix in qc_db_delete_autoqc
PBP
minor bug fix
minor bug fix for verify_bam_id
Merge in trunk for release-55.8