Filter based on 3SD given QC metrics

Adjust the numbers for future analysis
Find segments associated with CACNG2

Modular script. Alter to deal with other loci
QC script

Counts the number of segments
BED file script

Done before QC filtering. Separates samples on gender. Only segments
with confidence scores greater than 0.85 were included
Modular script for probe set retrieval: CACNG2

Alter for future use for different loci… Make a subroutine in the
future. Given an array of selected samples the script will create
files. Or even extend it further with the probe script I wrote during
the rotation period.
BED file script

Removes samples that failed QC
R history

graphing BP counts