includes long name
started cq incorporation
includes long name data and further owl logic according to source
minor changes to presentation
now works and includes some docs
remodelled pworddruplicte and pduplicate functions to include 'english' set,  privatised some functions, included mutation identification, and so on
corrected quarantine spelling, due to the main now existing refine methods now use owl-class instead as ontology must be passed on, rtype functions removed -- these are now just the classes themselves, save stats to file and so on.
simplified as check for atleast one letter was not required