stopped tracking Sphinx Makefile
renamed README from txt to md for Github formatting
updated README, tried to add Github flavored md tables
reordered / reformatted README
added SIR Z var entry to README table
added AUTHORS.txt file
update README after Skype with Lothar, add missing TODOs
tidy README.md TODO priorities
fix mod contrast LUT legend for all channels and recon map
rec Fourier option for manual minimum
rec intensity histogram option for manual background level
rename MotionCheck to MotionAndAngleDiff
sir recon noise cutoff fix, rename JM to J, log output cleanup
fix bug with rec fourier run dialog / manual noise cutoff
fix bug in impRec crop with odd sizes
work towards log output / reporting matching Lothars suggestions
fix ImagePlus report string, with title on separate line
update TODO after Skype with Lothar
rename MotionAndAngleDifference MotionAndIlluminationVariation
update calibration check menu names and result title acronyms