Cleaning up InsertMethylationFromRObject - removes unused mval related
commands.
Merge branch 'master' of https://github.com/apfejes/epigenetics-software
Merge branch 'master' of https://github.com/apfejes/epigenetics-software
Merge branch 'master' of https://github.com/apfejes/epigenetics-software
Merge branch 'master' of https://github.com/apfejes/epigenetics-software
Merge branch 'master' of https://github.com/apfejes/epigenetics-software
New options for filtering SNPs in probes and SNPs in cpgs in the basic analysis script.