_downloadLocations should return only file info, not a modified entity
refactored _getWithEntityBundle to require entityBundle parameter and optionally take entity
decreased maximum limit of query batch size from 5000 to 1000. see SYNR-731 and PLFM-2773
updates to docs
more docs improvements
exceptions should inherit from SynapseError
improved error handling for "synapse submit" and located a missing duck
use stdout for non-error messages. use the silent flag to turn them off
protect against parentId: None
removed handling for parentId=None per code review w/ Larsson
Fixed bug in handling annotations in the createOrUpdate=True case of syn.store
Merge pull request #155 from cbare/develop

Refactoring and documentation improvements