Boundary objects are now created and loaded properly. Not used yet.
Neighbors are now nulled out if they are blocked by the boundaries.
updated knowncase config. tests pass.
Updated config files to look cleaner and add boundary spesific config
objects. Set up default distance calculation.
replaced distanceTo function with generalized boundary version. tested
and works.
Cleaned up old distanceTo deprecated accessories. Boundaries are deleted
when the main solver is deleted.
Added subclass for concentrationwall and made the superclass work as a
standard wall.
Added initializeBoundaries and updateBoundaries to the site class and
placed them in the run method. The standard wall boundary class
initialize a field of crystals at its edge.
debugging implementation of fixed wall. Alot of NULL tests. Also made it
so that fixed crystal seeds are not able to move.
Fixed walls now work. All tests pass for full periodic. Things are
looking good.
mod gitignore