Annotations refactoring
Extractor & SangerUniversal applications refactoring + DataPreparationApplication
Merge pull request #21 from Feodorov/task/14070

Extractor & SangerUniversal applications refactoring + DataPreparationApplication
DistMat refactoring
SangerUniversal refactoring bugfix
Flat Clustering refactoring
InFusion refactoring
Lib-run refactoring
Task 14070 - DataPreparationApplication
Merge pull request #22 from Feodorov/task/14070

Task 14070 - DataPreparationApplication
TASK 16622
Global Alignment, Local Alignment, Semiglobal Alignment
with Affine Gap
with tests
TASK 13845
Clustering Application for pull request after Kostya code review
with Similarity and Hierarchy mode and use prev result Clustering
with acceptable test for Similarity
with new structure ioStreamManager
Merge pull request #23 from AleksandrFrolov/task/16622

Task 16622 - Affine Alignment
Merge pull request #20 from AleksandrFrolov/task/13845

Task 13845 - Clustering + Similarity Application
app -> job rename in lib-run
AnnotatorApplication refactoring
ABI2FastqApplication and TranslateApplication refactoring
PrimerApplication job refactoring
TecanApplication job refactoring
Application refactoring - common implementations moved to YLabApplication