Restored scripts

Moved back from models.js to internal scripts in md files
Updated README.md

Rolled back description of scripts in models.js
Added syllabus
Improved syllabus.md

Eliminated spaces in bold section items
More typos in syllabus.md fixed

Space missing between "Professor:" and "Max Lieblich"
Updated syllabus.md

Line breaks around professor info fixed
Updated syllabus.md

Updated midterm information locations
Cleaned up remaining \mathbf problems

I think!
more makefile changes

notable changes:
* no more install -D (so it works on OS X)
* uglify.js will be used if it is installed to shrink the javascript
* made much less hacky by using makefile's eval