Fix $app connection in Register Method

Register method failed to get a copy of the Application for all uses.
Task:MediaCore Including a new file to keep corejs media file changes, and including it and its dependencies in behavior.php TODO: Implement jQuery version in that file
Task:Core implementing mootools dependency removed core.js as a new file core-jquery-uncompressed.js
Modified functions: Joomla.renderMessages, Joomla.removeMessages
Task:Core Removed new JS file for the jQuery version of core.js and replacing the core-uncompressed.js with jQuery version, Fixing "Joomla" object not found error
Task:Core Including the compressed version of core.js and improving js code style
Task:Core Adding new line ending and convert to unix line delimiters
Task:Core Fix issue with invalid characters in validation message
Regression fix: module article news show old news first

After updating to 3.2.0 module article news show old.
To really fix the issue reported: http://joomlacode.org/gf/project/joomla/tracker/?action=TrackerItemEdit&tracker_item_id=28349&start=0

We should add desc/asc ordering in the menu while the current option should stay desc. Do not change the way it's currently work for backward compatibility.
Update behavior.php

Second parameter in [script] function should be now [false] for [tabstate] function. This is because this tabs-state.js requires JQuery not full Mootools framework. Setting this to [true] not only load Mootools when it is not required but also cause some conflicts if websites that depends on JQuery without noConflict.
 # [#32622] CSS Layout Issue with Protostar and Weblinks Front End
Submit Thansk George Wilson
(Fix #2474)
 # [#31678] [Regression] Modal behavior missing for user notes view
Thanks Ashan Fernando
(Fix #2473)
 # [#32337] Fix jform labelclass property  Thanks Viet Vu
(Fix #2269)
 # [#32124] phpwarnings if directory in unwritable.  Thanks Achal
Aggarwal
 # [#32623] Mod_login need to pick up com_users settings on links
Thanks Daniele Rosario
(Fix #2201)
 # [#32607] Remove two whitespaces and alphasort the content history
string  Thanks Tobias Zulauf
(Fix #2456)
 # [#32506] Very small center correction in the overrides table view
Thanks Tobias Zulauf
(FIX #2402)
 # [#32629] The media formfield is missing a space before the class
attribute Thanks Thomas Hunziker
(Fix #2478)
 # [#32588] Joomla 3.2 JavaScript errors (Uncaught TypeError: undefined
is not a function )  Thanks Jurian Even
(Fix #2486)
 # [#32523] Update some wrong docblock packages  Thanks Simon Asika
(Fix #2416)
 # [#32630] $config variable missing in comment  Thanks Demis Palma
(Fix #2479)