continued work on MCMC and optimization routine
Updated 2 R scripts
The Model_FINALFORCLASS does NOT include the MCMC that I was previously writing (I did this to keep the script more clean)
The Model_detailedMCMC includes the custom MCMC I was working on based on data assimilation papers (i.e., Richardson et al. 2010)
removed some script that I was not using- the custom MCMC that was written based on Richardson et al. 2010 was removed

Merge branch 'master' of https://github.com/kkremers/C-N-model

Conflicts:
	Model_FINALFORCLASS.R