added command line args to create_mock and extended makefile for generating data and profiling, profiling is work in progress
Spreadsheet referencing important data structures with size and notes and location or each.
Merge branch 'master' of github.com:ProfessorBrunner/aps
reverted accidental reversion  where unused functions were unremoved  and globals unrenamed
changed makefile to be templated file so users can have seperate versions