Add SQL files for input and results table.
Make count collect taxonomy information.
Also, remove fields from the JSON that we aren't using.
Fix formatting by deleting commented code that isn't used.
Merge pull request #18 from PDX-Flamingo/tax-info

Tax info + sql changes
Merge pull request #19 from PDX-Flamingo/add_mirror_subcommand

Add mirror subcommand
- rename name field to taxonomy, and use it to store that info
- refactor python code to make input table's id column be used
  for job UUID instead of whatever the parser returns
- add timestamp so input and result tables can be cleared more
  easily
- command line util updates to support the changes
Merge branch 'master' into tax-info
Formatting fixes.
Merge pull request #20 from PDX-Flamingo/tax-info

Update python code to handle new DB schema
Merge branch 'master' into queue_jobs

Conflicts:
	codonpdx/db.py