ENH: parallel context

Currently don't have support for mapping yet, but we can submit system calls or function calls now via IPython. The latter may require state updates on the engines, which is feasible from the current context. It is likely that mapping will go in relatively easily. 

From the shell:

```bash
$ echo -e "profile\tdefault" >> ~/.qiime_config
$ echo -e "n_engines\t2" >> ~/.qiime_config
$ parallel start
```

From within Python:

```python
>>> from qiime.parallel.context import context
>>> context.submit_sync('hostname')
('rl1-1-220-221-dhcp.int.colorado.edu\n', '', 0)
>>> def foo():
...     return "bar"
...

>>> context.submit_sync(foo)
'bar'
>>> def foo(a):
...     return a**2
...
>>> res = context.submit_async(foo, 5)
>>> res.result
25
```

From the shell:

```bash
$ parallel stop
```
We need o strip the `\n` because in the output files generated by QIIME the last line in the file may not include the EOL character. Thus, by stripping it and adding it back, we make sure that ll lines have it. I also thought that it was weird when I saw it in the original code, but if not done it does not work correctly. However, I did change the code to use fileinput. Thanks!