species tree used in the 23way amniot alignments
update for release 77
updated for release 77
Merge branch 'master' of https://github.com/Ensembl/ensembl-compara
dumped for release 77
Initialize treefam_10_baboon update pipeline.
cpanfile for Compara
Updated the list of tables for e77
minor changes for re-run of cat containing anchors
prev_rel_db needed to have admin access to previous DB in order to LOCK TABLE
Correcting resource class for check_reusability.
Update load_interpro_associations.pl
prev_rel_db needed to have admin access to previous DB in order to LOCK TABLE
Merge branch 'release/76' into release/77
Merge pull request #18 from uma-ensembl/master

You are the ones using this script, so if you need it :)
Set default resource class to use less memory (250Mb)
New analysis flag_update_clusters, used to flag the clusters that have changed
Update FilterDuplicates.pm

Updated genomic_align_blocks_identical method logic (no more test on identical score).
Added a flag 'filter_duplicates_net' so we can additional filtering logic for the filter_duplicates_net step (in addition to filter identical blocks, also filter overlapping blocks). This flag is set to 0 by default, and needs to be overwritten accordingly in the PairAligner config file, if you want to set it on.
Update EGPairAligner_conf.pm

Added flag 'filter_duplicates_net' to so we can have additional logic for filtering duplicates at the filter_duplicates_net step.
Merge pull request #19 from arnaudxk/master

Master