maximum_displacement option for 3D volume translation
Merge pull request #44 from pkaifosh/3D-bounds

maximum_displacement option for 3D volume translation
Reordered argument doc list to match actual argument order.
Fix for large datasets hanging whole_frame_alignment
fixes for 3D extraction summary pdf

NOTE: Pools currently hang
Fix for large datasets hanging extraction pools. Added chunksize limit.
Now pass frame index in to the workers so they can be read-out unordered.
adapted imaging parameters to Prairie v5.2