Converted FlipNormalSurfaces Algorithm

Changed the code for the algorithm portion of FlipSurfaceNormals so that
it will run on SCIRun5.
Converted FlipSurfaceNormals Module

Changed the FlipSurfaceNormals.cc file in modules so that it will run
with SCIRun 5. Also added the header file for the module.
Include FlipSurfaceNormals and BuildNoiseColumnMatr

Changes some implementation files so that they include
FlipSurfaceNormals and BuildNoiseColumnMatrix.