simplify match_patient_hla_to_query_alignment output data structure
add flatten_lanl_hla function
refactor list_scores_to_compute by creating the build_scoring_jobs function
add get_epitope methods; separate scoring_job class into its own file
update main function to work with new scoring_job class
Merge branch 'feature/fuzzy_matching' into develop
start the NEWS file
Merge branch 'release/v0.1'