DNA fixes

Fixes the naming issues tied to cloning.
Extinguishers

Duck, thank you.
Eliminating Phoron

It must be eliminated.
Revert "Eliminating Phoron"

This reverts commit 4440bcf7d5507f82c6126e63a4a149da8e273cbd.
Map Update 22AUG2014

Defibs.
Revert "Revert "Eliminating Phoron""

This reverts commit d07c026753ef93f321a807b99f7ed60744726ff1.
Paper Fix

Yay.
Merge pull request #240 from skull132/development

Update 22AUG2014