Committing updates to IReader/IWriter interfaces. They now read and
write from Forms. Updated MooseModel to utilize new IO interfaces
instead of having a direct reference to the MOOSEFileHandler. Removed
Generate YAML available executable from list on MOOSELauncher since it
is now provided in the Generate YAML action toolbar button. 

Documentation and commments updated throughout.

Signed-off-by: Alex McCaskey <mccaskeyaj@ornl.gov>