first pass CGNCParser for chicken names
recovered from cvs commits in 2012, not tested
ENSCORESW-366: CGNC parser updated to working link
some sanity checks to make sure the file contains the data we expect
adding some more methods for object_xref and identity_xref addition
required for RefSeqCoordinateParser
ENSCORESW-1116: first attempt at storing some form of scoring in the overlap mappings
ENSCORESW-1119: allow to skip import if no otherfeatures database, or no refseq_import data found
added RefSeq_import source for all Ensembl species
ENSCORESW-1132: updated file location, files are now numbered
warn if no file could be found at the location
ENSCORESW-1134: HGNC download file does not contain the version CCDS ids, fetch dbprimary_acc to match
utility script to convert tables between MyISAM and InnoDB
useful if wanting to scp an InnoDB database for example
strange typo went in there, corrected
ENSCORESW-1137: regexp now deals with GN that have or have not evidence level tags, and stores only the gene name