Split changes. Split step now runs through the genome using an iterative approach, skipping ignored sections.
Merge branch 'master' of https://github.com/cancerit/CaVEMan into split
Fixed no analysis file not opened before trying to write ignored regions bug
Merge pull request #24 from cancerit/split

Split merge to dev
Update Makefile

Version 1.5.0. Split step fixes, creates more even sized splits. Fixes #8
Makefile updated to make CaVEMan entirely standalone, it was previously using the libhts.so package rather than the libhts.a static library to compile.
Merge branch 'dev' of https://github.com/cancerit/CaVEMan into dev
Merge pull request #26 from cancerit/dev

Merge 1.5.1 pre release code to master for a full release