More adaptors use bind_param()
dnafrag_id must be defined to get other chr prop

Otherwise, the base Locus object would "fail fetching the data from other
sources"
input_clusterset_id default should be considered like undef
Fixed the error message if the command failed

Use "die" instead of "throw" (we don't need the stack).
stdout can also be useful for some programs
Added missing error message
PhyloXMLWriter now is base class of specific CAFE, GeneTree and GenomicAlignTree writers
We make sure we don't have a dup node
We make sure we don't have a dup node
Merge branch 'master' of https://github.com/Ensembl/ensembl-compara
PhyloXMLWriter is now base class of specific PhyloXML writers
Merge branch 'master' of https://github.com/Ensembl/ensembl-compara
param_exists() doesn't work well'
Added a module to get CAFE tree as hashes to serialize
Merge branch 'master' of github.com:Ensembl/ensembl-compara

* 'master' of github.com:Ensembl/ensembl-compara:
  Added a module to get CAFE tree as hashes to serialize
  We make sure we don't have a dup node
  We make sure we don't have a dup node
  PhyloXMLWriter now is base class of specific CAFE, GeneTree and GenomicAlignTree writers
The BaseAge produces a BED 3+3 file with AutoSQL
Can detect Java "MEMLIMIT" errors
INSERT IGNORE allows to rerun the job
Only the "default" trees should create jobs
New module to run ProtTest
Included the TreeFam v10 species tree (with 347 species)