Test commit
Merge branch 'master' of https://github.com/biojava/biojava.git
The DecimalFormats d3 and d2 are one digit too short. This has the
effect the first digit or sign of atom coordinates, occupancy, and
temperature factor are cutoff when using the toPDB method.
Merge branch 'master' of https://github.com/biojava/biojava
made method public
Merge branch 'master' of https://github.com/biojava/biojava
Merge branch 'master' of https://github.com/biojava/biojava
Merge branch 'master' of github.com:pwrose/biojava
Merge branch 'master' of https://github.com/biojava/biojava
First implementation of ASA calculation
Missing in last commit
Merge branch 'master' of https://github.com/biojava/biojava
Reordering structure-gui dependencies to place jMol LAST

This fixes (minimizes?) a subtle classpath issue due to jmol
including all its dependencies directly in the jar file, thus
breaking maven's dependency resolution.
Undoing bf4787bc:

- Should use RemoteScop by default for efficiency (matching the
  javadocs, not the erroneous inline comment
- The 'defaultVersion' field should be private. Depending on what you
  want, the current version can be accessed from
  ScopFactory.getScop().getScopVersion(), or the most recent version is
  ScopFactory.LATEST_VERSION.

Also added some simple tests for ScopFactory. These shouldn't require
any downloads not already needed by subclasses of ScopDatabaseTest.
Adding junit version 4.11 to pom.xml
Full implementation of ASA calculation including a unit test
Merge branch 'master' of https://github.com/biojava/biojava
Added Java Bean for mmcif category _struct_conn
Merge pull request #96 from pwrose/master

Added Java Bean for mmcif category _struct_conn
Merge pull request #95 from josemduarte/master

Calculation of ASAs: first implementation