New subprocess shell (in progress)

Runs python as subprocessor, which is not affected by Pweave namespace.
Running the code is implemented.
PwebSubProcessor weaving first sample document without errors
Improved passing options to subprocess
Implemented inline code chunks for PwebSubProcessor.
Updated tests
cleaning
Running code in separate python process implemented

PwebSubProcessor ready with command line options. Merging to master.
Merge branch 'feature-subprocess'

Conflicts:
	pweave/processors.py
Cleaning code style
Bugfixes to running and reading docs

Fixed line numbers for chunks
Fixed continue blocks for "epython" shell
Added timeout to shell commands