added a program to update OMIM files
wrote an auto updater for OMIM files; wrote an auto query and sanitizer for disgenet
rewrote parseMIM2gene to be much nicer
removed the old version of disgenet sanitizer
removed ranking.txt
removed plotROC.R
removed diabetesGenes.txt
moved the sanitized disgenet raw data to data/input
added script that ties everything together
updater for OMIM and gene
nice versions of grabber and sanitizer
grader.py now works in batches
plots all ROC curves in a batch
ROC curves
Merge branch 'master' into develop

2014-12-05 Friday

By Toby Li

This is version 1.0 of the grading program.
Automated portions:
	grab morbidmap from OMIM
	grab mim2gene from GENE
	grab output from disgenet by CUI
	sanitize output from disgenet
	grade many test sets at once (grader.py)
	plot many curves stupidly (not using build in R functions)
disgenet curves + auc for all OMIM diseases with >= 8 causative genes
moved TPR and FPR calculations to R script
query medgen to find CUIs associated with a disease mim
nicer code for converting between identifiers