Copy of thehyve/transmart-loader (see README.loader for copy of build
instructions) in src with psql support, updated KEGG support,
transactions extended for performance, exist checking matched unique key constraints.

src moved to src-old
Merge branch 'london_hackathon' of github.com:transmart/tranSMART-ETL into london_hackathon

Conflicts:
	Postgres/GPL 1.0/TM_CZ/I2B2_LOAD_CLINICAL_DATA.sql
	Postgres/GPL 1.0/TM_CZ/I2B2_PROCESS_MRNA_DATA.sql
	README.pipeline
Merge pull request #5 from thehyve/london_hackathon

vcf scripts improvements, miRNA and proteomics for postgresql
remove old src tree  src/com/recomdata replaced by src/main/groovy/org/transmartproject
Merge branch 'london_hackathon' of github.com:transmart/tranSMART-ETL into london_hackathon
Merge branch 'master' into london_hackathon
Standardize param. names for db user credentials
remove README.pipeline
Merge branch 'london_hackathon' of github.com:transmart/tranSMART-ETL into london_hackathon
Dos format to Unix
Merge pull request #6 from thehyve/london_hackathon

DOS to UNIX
pom.xml for mvn package
updates for oracle test served load
batch sizes; GO/GOA and BioMarker fixes
Kettle jobs for Postgres for RBM, metabolomics, qPCR miRNA, miRNAseq, proteomics, RNAseq
Kettle jobs for miRNA (Oracle) with marker_type as option
Merge pull request #7 from charlotte-raillere/london_hackathon

Kettle jobs for RBM, metabolomics, qPCR miRNA, miRNAseq, proteomics, RNAseq
geneinfo updated for postgres
Created a version annotation, VERSION.txt, to identify artifact as part of 1.2.0 release
Mistakenly put VERSION.txt in london_hackathon branch, should be in release branch