New branch with modification to add HG version and remove coor upload

Signed-off-by: Ke Hu <me@huke.info>
added blat query, store coor file in coor path.
modified coor related part
Fixed Result retrieve
cleaned unused files
modified reference length in stat
debug multi-thread problem in analysis result display
Revert "debug multi-thread problem in analysis result display"

This reverts commit 0f893da68ccdc0afd93c8feb84c1a7fd0445496b.
Revert "Revert "debug multi-thread problem in analysis result display""

This reverts commit 800290921d8614344bd94e770b6815a41adb829e.
fixed multi-thread problem
modified download page.
add paired-end data info.
added critical value parameter.
modified manuals.
1.add more info in result pages.
2. modified manual
3. fixed some bugs
change mapping part to per experiment per thread
fix uploading time
add libs
merge WithCoorQuery to master and fix deployment
merge WithCoorQuery to master and fix deployment