Changed default MODa probability threshold to 0.2
Updated PeptideCleavageCalculator to not use a RegEx if testing standard trypsin rules
TryGetScore now marks the second parameter as an output parameter
Now caching the PSM information when examining the next line to look for duplicate entries
Added FastReadMode option
PSMs loaded with FastReadMode enabled now have CleavageState initially set to ePeptideCleavageStateConstants.Unknown
Updated StreamReaders to use FileShare.ReadWrite
Updated ExtractCleanSequenceFromSequenceWithMods to use a RegEx to remove non-letter characters
Updated to System.Data.SQLite v1.0.93 (used by PeptideToProteinMapEngine.dll)
Change Post Build Event from SolutionDir to ProjectDir