Initial commit
added --with-protobuf option to configure
fixed Makefile to build both harvest and libharvest.a, and to install harvest
changed HarvestIO from subclass to wrapper; close output streams
removed zlib and protobuf from static library
adding include flags to makefile
dynamic zlib
fixed warning from using -lz without linking
genbank optional
MFA support
xmfa seq load and configure fix
writeSnp hooks
xmfa findVariants and writeSnp
fix for xmfa load with vcf
add help message and quiet flag
add writeVcf function
mavericks build fix
buffer size fix
Merge branch 'master' of /Users/ondovb/Dropbox/parsnp/harVest/harvest-git
basic bed interval filtering