Add symmetry contacts scene functionality
Add requirements
Add directory structure. Create whynot.check for now
Allow 4 character WHAT IF residue names; necessary for nucleic acids. Add corresponding tests.
Allow negative PDB numbers
pep8
Add pep8 to requirements
Improve log statements a bit
Always log python logs to file in scenes dir
Make WHY_NOT db a config setting
Add setup file
Improve regex for WHAT IF output. Add corresponding tests
Change WHY_NOT file content for Coos
Fix #1. Use json settings.
Correct settings path
Merge branch 'settings' into develop
Fix #3. YASARA Processors(cputhreads=1). Add YASARA version to README.
Improve settings setup (#1).
Add ion site (iod) parser and tests
Add ion site scenes