doxify fixes: add to distclean target, use \retval instead of \return, avoid duplicating comment lines


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14143 bac0169d-1eea-4375-b5f6-f89d2ced9994
doxify: always print out header in exactly the same order


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14144 bac0169d-1eea-4375-b5f6-f89d2ced9994
doxify: correctly print params for functions with a RETURN(), better subroutine name pattern match to allow use with template files


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14145 bac0169d-1eea-4375-b5f6-f89d2ced9994
Apply doxify script to (almost) all of CP2K code-base


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14146 bac0169d-1eea-4375-b5f6-f89d2ced9994
 bug fix


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14147 bac0169d-1eea-4375-b5f6-f89d2ced9994
Remove debug code that slipped into the last commit.


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14148 bac0169d-1eea-4375-b5f6-f89d2ced9994
Input Description Change

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14149 bac0169d-1eea-4375-b5f6-f89d2ced9994
Fix some formatting that confused doxify


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14150 bac0169d-1eea-4375-b5f6-f89d2ced9994
Modify doxify to correctly process equations in comment blocks, and apply it to the code.


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14151 bac0169d-1eea-4375-b5f6-f89d2ced9994
 index of mo_cube; some unused variables


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14152 bac0169d-1eea-4375-b5f6-f89d2ced9994
 test index mo cubes


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14153 bac0169d-1eea-4375-b5f6-f89d2ced9994
Create swarm package

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14154 bac0169d-1eea-4375-b5f6-f89d2ced9994
Fix hard-encoded unit 6 in f77_interface.F

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14155 bac0169d-1eea-4375-b5f6-f89d2ced9994
bug fix: only write to output_unit>0, no inquire on output_unit<0, make sure stop_program aborts if called from non-ionode.


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14156 bac0169d-1eea-4375-b5f6-f89d2ced9994
[CP2K:5549] improvement to the print of TDDFPT module


git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14157 bac0169d-1eea-4375-b5f6-f89d2ced9994
Move write_restart_header() into cp2k_info.F

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14158 bac0169d-1eea-4375-b5f6-f89d2ced9994
Calculate nfree_qm on the fly

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14159 bac0169d-1eea-4375-b5f6-f89d2ced9994
Move copy_wiener_process() into qmmm_update.F

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14160 bac0169d-1eea-4375-b5f6-f89d2ced9994
Make qmmm_update_force_mixing_env() independent from md_env

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14161 bac0169d-1eea-4375-b5f6-f89d2ced9994
Make qmmm_update.F independent from input_cp2k_restarts.F

git-svn-id: svn://svn.code.sf.net/p/cp2k/code/trunk@14162 bac0169d-1eea-4375-b5f6-f89d2ced9994