Added project creation for javascript
Added generate project json file method
Added step to upgrade junit to 4.8.1
Changed the malabar fix for groovy to set the java options after malabar loads
Refactored the way window splitting works for side panels to remove the need for window rotation
Refactored the way that create-project works to add a hook to kill processes after they've been finished with
Finished implementation of Javascript and Java projects
Fixed bug where we overrode the replace-regexp-in-string method by accident