Localization Microscopy: Commons Math 3.3

Upgraded the Localization Microscopy plugin to commons-math3-3.3.jar.
(Still requires testing.)

Signed-off-by: Luke Stuyvenberg <stuyvenberg@wisc.edu>
Pixel Calibrator: Upgrade to Commons Math 3.3

What it says on the tin. ;-)

Signed-off-by: Luke Stuyvenberg <stuyvenberg@wisc.edu>
mmstudio, autofocus: Upgrade to Commons Math 3.3

And also changed the buildscripts file to match. Note that this commit
should also require a change to 3rdpartypublic/classext, to add the new
JAR there.

Signed-off-by: Luke Stuyvenberg <stuyvenberg@wisc.edu>