Added AHOT transport equation source code for example
Added notes and changed fortran propriotary ifort compiler to gfort in the compile and debug files
Merge pull request #4 from howland/temp

Added second example wrapping AHOT
Added ifort flags file containing useful information about ifort flags used to compile
Updated AHOT flags and notes
Added gnu flags file
Merge pull request #5 from howland/master

Added notes for compiler flag conversions and attempted to alter AHOT compiler flags
Merge pull request #6 from howland/temp

Added notes for compiler flag conversions and attempted to alter AHOT compiler flags
some rearrangement of notes and additional comments reflecting rachel's build.