Added section notes for advanced set up, as well as its entry in the table of contents.
Added install.conf step
Install.conf tutorial complete
Added setup_env.sh tutorial file, as well as its mapping in contents.
Completed setup_env.sh notes
Added setup_cmake.sh information, as well as its entry in our contents
Added bullet set up file notes (currently empty) as well as its entry in our contents file.
Completed notes on setup_bullet.sh