Configuration javadoc update
Application controller interface & implementation  javadoc update / clean up
Application controller implementation javadoc touch
Audio controllers implementation javadoc update / cleanup
Extraction controllers implementation javadoc update / cleanup
DAO interface & implementation javadoc update / cleanup
Factories implementation javadoc update / cleanup
Features implementation javadoc update / cleanup
Models implementation javadoc update / cleanup
Services implementation javadoc update / cleanup
Tools implementation javadoc update / cleanup
Command line "application" removed
JSONParserTest update