Allow for a >1 count increment in B&H .sdt Files.
Attempt to improve the comments on this behaviour.
QuickTime: reset stream if an invalid atom length is found

This is particularly necessary if the "header" is at the end of the file.

Also clarifies a variable name that's been annoying me for a while, and
fixes a couple of typos.

Fixes #12218.
Metamorph: be less aggressive about closing readers right away

If the last plane has been read, or more than 128 readers are open, then
we can close the reader; otherwise, keep it open to prevent
reinitializing a reader on every openBytes call.

Fixes #11968.
Flex: fix whitespace annoyances
Flex: fix the case where one field is stored in each file

See #11382 and
http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2014-March/002721.html
Revert "CZI: restrict dimension adjustment"

This reverts commit f8ce7b1e749fe7d85d7fac1d2d547861166d3d43.
Flex: one more fix for dimension adjustment

The extra check for a valid image count is not necessary if only one
file is present in the dataset.
Flex: correct channel indexing when there is not one name per plane
Revert "Revert "CZI: restrict dimension adjustment""

This reverts commit f6ebfd82805ed6175a1ed693da1a9e3c10cd6c91.
Add sifting appender to split logfile by thread

With this commit, the log for each thread in multi-threaded automated tests
should be stored in its own logfile simplifying the result parsing. The thread
is removed from the appender pattern to prevent duplication.
Add debug level info to the logfile

This should ideally simplify detection of errors
Log unsuccessful metadata result using the ERROR debug level
Increase SiftingAppender timeout to 60 minutes
Move automated tests log files to target/ directory
Clean target/ directory as part of the `clean` target of build.xml
Fix whitespace with ERROR debug level
Fix logback configuration to pass loci.tests.testng INFO to stdout only

The logfiles created with the SIFT appender should still contain the FormatReader INFO and the loci.tests.testng DEBUG level.
Move additional logging at DEBUG level to strip it from console output
Set parseConfigFile() exception output at DEBUG level