[ADAM-331] Moving code coverage analysis into a profile, so it is not packaged into artifacts.
Merge pull request #334 from fnothaft/fix-ccov

Moving code coverage into a profile
[ADAM-330] Make mismatch and deletes positions accessible
Merge pull request #330 from hammerlab/mdtag-access

Make mismatch and deletes positions accessible
[ADAM-311] Adding several simple normalizations.
Merge pull request #311 from fnothaft/simple-normalizations

Adding several simple normalizations.
[ADAM-309] Update to bdg-formats 0.2.0

Tests not passing yet
Fix some tests to start running again