First steps of refactoring underlying cross validation code.
More updates to refactoring of internals.
Fixing problems with file ordering
Making model building less type-specific.
New plots with refactored subsystetm.
Sorting out cluster plots.
First working version with simplified plots
First working version with quick analysis.
Moving functions to more appropriate files.
Fixing small bugs
Error Check for differeing labels and feature lengths
Enabling calculation of differential features.
Fixing error passing too many arguments to abundance calculator
Removing many arguments explicitly from driver function.
Fixing problems with differential features and cross validation
Displaying output for each condition analysis.
Updating passing correct conditions.
Folds must be sorted to make things work corrctly. This makes me concerned.
Fixing problems with plotting results.
Remove Junk