Merge tag 'tagsv1.0.0' into develop

Tagging version v1.0.0 tagsv1.0.0
broke apart the index.php file to wrapers to help program in chunks
Merge branch 'release/moveRedundantCodeToIncludedFiles'
new direcories to house functions and scripts
Include functions.d

Added info text to the functions.d and scripts directories
In the wrappers/start.php file add include for all functions in the
functions.d directory
added references to vendors
added document root to the site variables
Merge branch 'hotfix/addScriptsDirectory'