[msm] Added its api implementation
[msm] Added its api implementation
[msm/estimation] largest_connected_submatrix accepts user specified largest connected set. Also added unit tests for this feature
[msm/estimation] User specified largest connected set feature for largest_connected_submatrix in api-calls and in api-tests
[msm/ui] MSM-object for user-API
[msm] IMplementation of user-api function msm
[msm/ui] Changed import statements to safe namespace from overflowing
[msm/ui] Implementation of Chapman-Kolmogorov test
[msm/flux] Changed docstrings
[msm] user-API implementation for MSM-object, tpt-Object and Chapman-Kolmogorov test
[msm] user-API functions are now part of the pyemma.msm namespace
[msm] Completed header
Working on the docu for the user-api
[doc] fix Parameters section
[msm/estimation] Fixed docstrings of bootsrap methods
[doc] Add autodoc for msm user-API
Ignore auto generated .rst files
Mergin remote and local
Merge pull request #9 from trendelkampschroer/devel

User specified sets
[ci] import appveyor support with automatic deployment (yet to be tested)