add GARun object
add /runs/search method
removed a TODO comment
style cleanups
fixed typo
rename GARun to GAReadGroupSet
rename GARun to GAReadGroupSet
fix capitalization
Merge pull request #52 from dglazer/add-GARun

Add GAReadgroupSet object and search method
Change type of baseQuality to an array of int

* Updated type of GARead.baseQuality to be array<int>
* Updated documentation of GARead.baseQuality
* Some trailing spaces automatically deleted
Merge pull request #62 from delagoya/base_quality_int_array

Change type of baseQuality to an array of int
"AVRO" should be "Avro"
Merge pull request #64 from hammer/patch-1

"AVRO" should be "Avro"
Merge remote-tracking branch 'upstream/master' into AlignmentRecord

Conflicts:
	src/main/resources/avro/reads.avdl