Merge pull request #1 from cancerit/dev

error in name of program
Merge pull request #3 from cancerit/dev

Bug fix 1.0.1
Merge pull request #5 from cancerit/dev

v1.0.2 merge to master
Merge pull request #6 from cancerit/dev

Tested CN conversion and fixed missing platform entries in VCF
Merge pull request #7 from cancerit/dev

merge in cgpAppendIdsToVcf.pl
Merge pull request #8 from cancerit/dev

Primarily setup.sh fix
Merge pull request #9 from cancerit/dev

Fix to dependency install
Merge pull request #10 from cancerit/master

Master