Initial cleanup.  Removed lots of unneeded junk files used to build the librarly.  Adeed preliminary autotools scripts.
Added bootstrap file and fixed a few makefile issues.
Did some macro cleanup for M$ stupid.  Why are we using MSVC for anything?
Fixed a few warnings related to const char *
Fixed a few other more questionable warnings for uninitilzed variables.  TODO Someone who knows the code better than I do should review these changes!!!