extend resource manager to manage input buffers
Adjust input buffer related codes

One change leads to another, the changes look a lot but there is only
one goal. That is, moving the input buffr management into
ResourceManager.
Cleanup physical channel states

demap the logic channel from the physical channel.
Do not serialize TB when no schema is stored

This occurs when a channel closes abnormally.
NChilada: fix two warnings
eclipse settings: turn off @author

Finally found the dang setting to turn this off. I thought I had already
myria: remove '@author dhalperi' from all files

The command I used:
    sed -i.old '/@author dhalperi/d' **/*.java
build.gradle: update jars
WorkerCollection: add regex to URI
DatasetResource: add query param to limit query

Get datasets for a particular query
Revert "NChilada: fix two warnings"

This reverts commit ca532407737106314900e45de984a307a51a71fe.
NChilada: fix 2 warnings, part 2

One of the functions I thought was unused is in fact used via reflection
remove my name from @author tag in the comments.
Merge branch 'master' into slxu-kill-cleanup
fix extra space in comment
Add a getInputBuffer method
Merge pull request #582 from uwescience/dhalperi-track-relations-created

Dhalperi track relations created
Execute fragment.init in fragment executor
Remove useless synchronization
Merge branch 'master' into slxu-fragment-init-in-fragment-executor