Fixed query dependency reference
Removed extra dependencies
Merge branch 'pr/45'

Conflicts:
	src/main/javascript/Biojs.Protein3DCanvas.js
Removed conflicts in Protein3DCanvas
included irc notifications in travis build
Added RemoveParentDependency tag
Added removeParentDependency management
Merge pull request #47 from ftalo/master

Added tag removeParentDependency in the doc generation