Establish the low-level wrapper around the kmedoids c code

fix rename

fix undefined behavior

change contigify to return the mapping

Add sklearn API kmedoids

Initial draft of minibatch version

comment

Rewrote the minibatch fit() loop, and added a new c function to compute the intertia at the end

Generic inertia function

implement assign_nearest function

libdistance

cleanup

remove files from other PR

typo fixes

typo fixes

mdtraj-dev

debug import error

debug import error

debug import error

debug import

debug

debug

libdistances

uninitialized variable?

undefined variable?

only master

PR

remove check
Merge pull request #300 from rmcgibbo/libdistance

Implement new low level library for generic distances: libdistance