Refactor API code to use annotator-store flaskless

Everything seems to work: reading, creating, updating, deleting, searching, permissions seem to work but need better testing, and in general more tests and thorough code review would be good.

To keep a consistent style and make refactoring easier, I decided to use traversal with a `@view_defaults` class everywhere, using the defaults class to specify the `context` predicate, so as to group the views within that. For the same reasons I do not use view names but use a resource for each location (I explictly state `name=''` for clarity, though that could be removed). I think this style works out nicely.

I put some questions in the comments, just search for the question marks.

The dependency on the next (flaskless) annotator-store version has yet to be added.

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Well spotted. From a quick check, `request.root`, an instance of our `RootFactory`, seems to even exist when retrieving a route-based url (rather than traversal-based, which the `RootFactory` is used for). I guess it should always be fine then (docs don't mention anything special either).