Remove compilation warnings from main.cpp
Remove compilation warnings from CFTimeAPGenerator.cpp
Resolve compilation warnings from TAPAlgorithms.cpp
Resolve compilation warnings from TemplateArchive.cpp
Resolve compilation warnings from EventNavigator.cpp
Added constructor-type arguments and remove left-over debug messages
Tidy intentation of PlotTDiff
Stop trying to get pulses from the list outside of the loops over pulse lists as
empty pulse lists was causing a crash.  This was described on issue #169, but it
must have been missed.  As it was, the code crashed immediately.
Reduce binning for TDiffs which were causing bad_alloc
Updated production.cfg with requested TDiff plots.
Merge branch 'release/rootana_v3'
Merge commit 'rootana_v3' into develop